PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN14881.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 35505.5 Da PI: 5.8281 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.1 | 3.6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl PIN14881.1 14 KGLWSPEEDEKLYNYITRYGVGCWSSVPKLAGLERCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.7 | 3.5e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg ++ eE+ l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ PIN14881.1 67 RGTFSHEEENLIITLHEALGNR-WAQIAAQLP-GRTDNEIKNFWNSC 111 899*******************.*********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MGRHSCCAKQ KLKKGLWSPE EDEKLYNYIT RYGVGCWSSV PKLAGLERCG KSCRLRWINY 60 LRPDLKRGTF SHEEENLIIT LHEALGNRWA QIAAQLPGRT DNEIKNFWNS CLKKRLMKQG 120 IDPNTHKPIE QIQVKDEQDC TNSDSLPILQ PKGHPNFPIS TQMDQESYHH SMQSSSSVCK 180 QVYDPLFLSE FQESVDPNGY LSTFLSHFQQ NLVSDNQINP SSGFNSMPNL TSFDYSDTSV 240 SRMSTSLINE EKDISNCGTF SWDGENKLDS VFQLYFNGIQ AEETKHNLFQ EGDKLQLNEQ 300 SSGDYSNYQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G57560.1 | 3e-81 | MYB family protein |