PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14819.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 513aa MW: 56125.5 Da PI: 7.7752

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14819.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.7	4.2e-32	219	275	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg+nWrKYGqK+vk se+prsYY+Ct+ +Cpvkkkvers+ d+++ eitY+g+Hnh+ PIN14819.1 219 SDGFNWRKYGQKHVKASECPRSYYKCTHLNCPVKKKVERSS-DGRISEITYKGQHNHD 275 7**************************************.*************7 PP
2	WRKY	104.3	6.4e-33	399	457	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYYrCt++gC+v+k+vers+ dpk+v++tYeg+H h+ PIN14819.1 399 LDDGFKWRKYGQKVVKGNPHPRSYYRCTYTGCNVRKHVERSSADPKAVITTYEGKHIHD 457 59*******************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MGETVEDASK ASKPKPTILV PPRGSMEFLF AHGSGPGFSP GPMTLVSSLF PEKSPFSFSQ 60 LLAGAMASPL AAKPGLLPAS ESSEQKWNKP MNLTATAQLQ LENLSPLFMV PAGLSPSGLL 120 NSPGFLSPLH SPFGMSHQQA LAHVTAQAAM SQSFKKMQSE FQHDSAEASV NQSSAAPTET 180 LTQQTNPLPP SSESLKIESS EVSESDKKTA YVAGDKPASD GFNWRKYGQK HVKASECPRS 240 YYKCTHLNCP VKKKVERSSD GRISEITYKG QHNHDPPQPN KRGKDSFGTD KTINSHLKPV 300 FHSQSQNEAD RSQINGGVTV LSEPENFQAT TQESFEHHPV DSHNDNVENN VILVDEGDGD 360 EPVPKRRSME IGPSVPPLSH QTGTDSKIVL QTRSEVDLLD DGFKWRKYGQ KVVKGNPHPR 420 SYYRCTYTGC NVRKHVERSS ADPKAVITTY EGKHIHDIPT GRYSSHGTAN SSSQQLKTQK 480 TESKNPSQNK EIDYGNKDQI PITLQLKEEQ IAA

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MGETVEDASK ASKPKPTILV PPRGSMEFLF AHGSGPGFSP GPMTLVSSLF PEKSPFSFSQ  60
LLAGAMASPL AAKPGLLPAS ESSEQKWNKP MNLTATAQLQ LENLSPLFMV PAGLSPSGLL  120
NSPGFLSPLH SPFGMSHQQA LAHVTAQAAM SQSFKKMQSE FQHDSAEASV NQSSAAPTET  180
LTQQTNPLPP SSESLKIESS EVSESDKKTA YVAGDKPASD GFNWRKYGQK HVKASECPRS  240
YYKCTHLNCP VKKKVERSSD GRISEITYKG QHNHDPPQPN KRGKDSFGTD KTINSHLKPV  300
FHSQSQNEAD RSQINGGVTV LSEPENFQAT TQESFEHHPV DSHNDNVENN VILVDEGDGD  360
EPVPKRRSME IGPSVPPLSH QTGTDSKIVL QTRSEVDLLD DGFKWRKYGQ KVVKGNPHPR  420
SYYRCTYTGC NVRKHVERSS ADPKAVITTY EGKHIHDIPT GRYSSHGTAN SSSQQLKTQK  480
TESKNPSQNK EIDYGNKDQI PITLQLKEEQ IAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-125	WRKY family protein