PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14635.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 655aa MW: 72473 Da PI: 5.7639

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	490	538	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v+++G g+W+ I r Rt ++k++w+++l PIN14635.1 490 PWTLNEVVKLVEGVAKYGAGRWSEIKRVAFasySYRTSVDLKDKWRNLL 538 8*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MEAVVDIVVN EEAALENCST SQKTSDPVVY QLVRVDGNGR LVPATDDEVK EVENLLEDDK 60 NKVKTAETRQ TLECSTDYGC RPSESNKVLF KGSEGQPQPE VPEVGAEKSN VAPDPAMDSE 120 HEERTPSMVS NASDGRACQS GSPEGCPKLL GGLDESKTSS SPIDTSSKPD FSLLNGEIRL 180 DNLSVKDLQE TFRATFGRET SVKDKQWLKR RIIMGLTNSC DFSTTTFVII DNKVVKQGKE 240 ETCKSEDCSV LVDCVVTSAM ENNWLDKQNE IHSIATGTKI ESSTFQDNCG SNDADTEERP 300 AKRVRKPTKR YIEEISEGEP RDFGAKIISS VNHPAQNQSS SKVSARAIQN FGVDRRCLTR 360 KDSLGGSGIQ VPYVSRIRRS RPRENYMTLM KFQPSGMGTS TRLEENDVES SKQHDNEGGN 420 EVIRNSLSPR WIQEPPVASS ESCEPYTEKN TTQLEKEVKV KSMESYETSS DDVVTVPTAN 480 GGMRRKHHRP WTLNEVVKLV EGVAKYGAGR WSEIKRVAFA SYSYRTSVDL KDKWRNLLRA 540 SLAELPTGNG INSSRKQASV PIPASILSRV RELADLNAQA SPSLTSSKLA GHNDSNKTVH 600 ETGPGHTGHM WGQKLHLLCD CYTRQFISFL AMGVEFGIEY VMRFCFELQL GSLLG

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MEAVVDIVVN EEAALENCST SQKTSDPVVY QLVRVDGNGR LVPATDDEVK EVENLLEDDK  60
NKVKTAETRQ TLECSTDYGC RPSESNKVLF KGSEGQPQPE VPEVGAEKSN VAPDPAMDSE  120
HEERTPSMVS NASDGRACQS GSPEGCPKLL GGLDESKTSS SPIDTSSKPD FSLLNGEIRL  180
DNLSVKDLQE TFRATFGRET SVKDKQWLKR RIIMGLTNSC DFSTTTFVII DNKVVKQGKE  240
ETCKSEDCSV LVDCVVTSAM ENNWLDKQNE IHSIATGTKI ESSTFQDNCG SNDADTEERP  300
AKRVRKPTKR YIEEISEGEP RDFGAKIISS VNHPAQNQSS SKVSARAIQN FGVDRRCLTR  360
KDSLGGSGIQ VPYVSRIRRS RPRENYMTLM KFQPSGMGTS TRLEENDVES SKQHDNEGGN  420
EVIRNSLSPR WIQEPPVASS ESCEPYTEKN TTQLEKEVKV KSMESYETSS DDVVTVPTAN  480
GGMRRKHHRP WTLNEVVKLV EGVAKYGAGR WSEIKRVAFA SYSYRTSVDL KDKWRNLLRA  540
SLAELPTGNG INSSRKQASV PIPASILSRV RELADLNAQA SPSLTSSKLA GHNDSNKTVH  600
ETGPGHTGHM WGQKLHLLCD CYTRQFISFL AMGVEFGIEY VMRFCFELQL GSLLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	6e-92	MYB_related family protein