PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN14588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | LBD | ||||||||
Protein Properties | Length: 110aa MW: 12375.1 Da PI: 8.2039 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 65.2 | 1.6e-20 | 6 | 52 | 1 | 47 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllk 47 +Ca+Ck+ rr+Ca +C++apyfpa++p+kfa+vhk+FGasn++k+l+ PIN14588.1 6 PCASCKLRRRRCAIECIFAPYFPADDPHKFAIVHKVFGASNLSKMLQ 52 7********************************************98 PP | |||||||
2 | DUF260 | 22.2 | 4e-07 | 52 | 82 | 66 | 96 |
DUF260 66 earardPvyGavgvilklqqqleqlkaelal 96 ++ra+dPvy +vg i+ lq+q++ql+ +la+ PIN14588.1 52 QVRAQDPVYRCVGAISYLQNQVSQLQMQLAV 82 68**************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence |
MGENSPCASC KLRRRRCAIE CIFAPYFPAD DPHKFAIVHK VFGASNLSKM LQVRAQDPVY 60 RCVGAISYLQ NQVSQLQMQL AVLLNFTSSN SSVNYDSFNE ESLYGRDMVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 2e-43 | LBD family protein |