PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14585.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 306aa    MW: 32829.7 Da    PI: 5.1744
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.6e-10155199554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P++      K + a++L +  +Y+k L
  PIN14585.1 155 HSIAERLRRERISERIKALQELVPSC-----NKTDRAAMLDEILDYVKFL 199
                 99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MATNPPEGYA SDDFLEQILS IPSYAGLSGA DGGNPSETTS LNETVSHLGP AGAAAGLHHP  60
PSMFPLSLSL DNGRDAVNDN GAFAVKHESE GVNNGMGGLY PAFDHLQAHA LRHPAPQLQQ  120
AFHGQPTASA TATVPHPPGI RPRVRARRGQ ATDPHSIAER LRRERISERI KALQELVPSC  180
NKTDRAAMLD EILDYVKFLR LQVKVLSMSR LGGAGAVAQL VADIPLQASE DETGEIGSNQ  240
HVWEKWSNEE TEHEVAKLME EDVGAAMQFL QSKSLCIMPI SLATLIYPSN QSDDPTLVKP  300
ESSAPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160165RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.24e-72bHLH family protein