PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN14521.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 408aa MW: 45294.9 Da PI: 6.987 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.3 | 7.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl PIN14521.1 14 KGLWSPEEDEKLIKHITKYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.9 | 1.3e-14 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w+ PIN14521.1 67 RGTFSQEEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWN 109 899*******************.*********.*********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQRG 120 IDPNTHKPIS EVENNINNEE KASGNSKNTE KTSEGSSELT FAEAENSNNH ENPSNLDGRY 180 PPLLENAATN LTAAAPNSTH EFFLNRFVST HETATAGCKP SDLSGFLSFQ QINYGSPGPN 240 IGLSMNPNAN LYFNSNSKSS EINISDHFNT TNIASTLLPS SSSINLSSSN PISPFSVKFE 300 NNVSSFFEGS GAFPSWAPPD CEKSEKESTT HITEDIKWND YLHTPFLMGN SIHNPTSGQD 360 IYGETKSQGN FGAEASFSSG NWQQSLQATE TYGKHYQRLP AATFGQFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 7e-92 | MYB family protein |