PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14155.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 364aa MW: 42577.6 Da PI: 6.8069

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69.7	5.7e-22	81	162	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++qe+++Lie r ++e ++ ++k+ k+lWe v+++mr++g++r+ qCk+kw+nl ryk +++ ++ + cp+fd+l+ PIN14155.1 81 QWSNQETRDLIENRAQIEWDFTASKRSKNLWEMVANRMRDKGYRRTTDQCKCKWKNLVSRYKGQGASDVDN----GRLCPFFDELH 162 7************************************************************99999984....568****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MMYNNSGNVS THLPSSSNAT TPRNPSISYP LLHQHQVHHP IMIPLPPSPS LPPFSAAGGS 60 GGGGADDDDD EFPRRDERFP QWSNQETRDL IENRAQIEWD FTASKRSKNL WEMVANRMRD 120 KGYRRTTDQC KCKWKNLVSR YKGQGASDVD NGRLCPFFDE LHAVFTARDN RMKQAQLDLE 180 TGMARTNTMQ PGQLEVETSM MKGKKKLYNV SADHSREDIS EEQDDEEEIE VDHAGKGRLL 240 PKRKAAREKR QKVAEKETNP IPSLTNANKN VLNSLQEIMR NFIVQQQRID MQWRESMEKH 300 AEEREQFEQE WRERMEKLER ERLMMEQAWR EREEQRRLRE ESRAEKRDAL LTTLLNKLIR 360 DESP

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MMYNNSGNVS THLPSSSNAT TPRNPSISYP LLHQHQVHHP IMIPLPPSPS LPPFSAAGGS  60
GGGGADDDDD EFPRRDERFP QWSNQETRDL IENRAQIEWD FTASKRSKNL WEMVANRMRD  120
KGYRRTTDQC KCKWKNLVSR YKGQGASDVD NGRLCPFFDE LHAVFTARDN RMKQAQLDLE  180
TGMARTNTMQ PGQLEVETSM MKGKKKLYNV SADHSREDIS EEQDDEEEIE VDHAGKGRLL  240
PKRKAAREKR QKVAEKETNP IPSLTNANKN VLNSLQEIMR NFIVQQQRID MQWRESMEKH  300
AEEREQFEQE WRERMEKLER ERLMMEQAWR EREEQRRLRE ESRAEKRDAL LTTLLNKLIR  360
DESP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38250.1	2e-24	Trihelix family protein