PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14136.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 329aa MW: 36558.6 Da PI: 7.0077

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14136.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.4	7.9e-09	28	71	3	45
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwq 45 WT Ed+ + +a ++ ++ +W++Ia ++ g+t +++k+++ PIN14136.1 28 HWTRKEDKAFENALALCYNDadQWDKIALAVP-GKTIEDLKLHYE 71 5*****************************.********96 PP
2	Myb_DNA-binding	44.5	3.7e-14	119	163	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+++++ + +++G g+Wk+I+r+ ++++ q+ s+ qky PIN14136.1 119 PWTEEEHKRFLYGLQRYGRGDWKSISRYCVLTKSNSQVASHAQKY 163 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MDTDWTFSSC FWLWEEDIEF KNACSGSHWT RKEDKAFENA LALCYNDADQ WDKIALAVPG 60 KTIEDLKLHY EALRDDVVAI ESGKVPLPRY SSDVSTRKKK KEKKKKVKSV RIGVQRGVPW 120 TEEEHKRFLY GLQRYGRGDW KSISRYCVLT KSNSQVASHA QKYFKRLDSA TKAGKRPSIN 180 DITIVPLESI STPEKPTTIN VPIYQKQAST AVCPYPNDTS TTIAAYPKEA SSSVMQQMLP 240 PTPFGPFSSP MLTQAGTSAA GASACGMFGP PIASEPIQEP SHLVGLPTYL LPDPLMQETG 300 EPAAGSFDLP STSEIMNLDM FMLANFLDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	102	RKKKKE
2	97	103	RKKKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23650.1	5e-48	MYB family protein