PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN13854.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 20923.4 Da PI: 4.3467 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.3e-19 | 31 | 82 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++k++g+Wv+eIr+p+ + r++lg+f t+e+Aa a++ a+++l+g PIN13854.1 31 PVYRGVRRRKSSGKWVSEIREPK----TpNRIWLGTFPTPEMAAVAYDVAALALKG 82 68*******************94....478***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MSQSPGKKRG GASSVSPPSD GGGSDFSGGR PVYRGVRRRK SSGKWVSEIR EPKTPNRIWL 60 GTFPTPEMAA VAYDVAALAL KGKEAELNFP NSASSLPVPA STSPRDIQAA AAAAAAATGA 120 AADALGGGNV VVETPKSEAE MQPEIIPVVD EFFDEDLIFD LPNVLMNMAQ GMMISPPRIG 180 FEDDENDFEY EDLWSYK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 6e-22 | ERF family protein |