PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13471.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 266aa    MW: 30700.3 Da    PI: 7.1892
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.13.5e-171562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ed++l+d+v+++G g+W++++   g+ R +k+c++rw +yl
       PIN13471.1 15 KGLWSPDEDQKLKDYVTKHGHGCWSSVPINAGLQRNGKSCRLRWINYL 62
                     678*******************************************97 PP
2Myb_DNA-binding476.1e-1568111146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++  E+e ++ +++++G++ W+  a++++ gRt++++k++w++
       PIN13471.1  68 RGPFSLAEEETILALHQKFGNK-WSQMAHHLP-GRTDNEIKNYWHS 111
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MGCKPLEKTK KKHNKGLWSP DEDQKLKDYV TKHGHGCWSS VPINAGLQRN GKSCRLRWIN  60
YLRPGLKRGP FSLAEEETIL ALHQKFGNKW SQMAHHLPGR TDNEIKNYWH SCLKKRATKM  120
AQNAQEQHNN AQIQTLESSS SSLTSITRNS FETFEGSLMD TDQSMQKRSF PKVIFAEWLS  180
FDQYYGQNLG NYFENVTDIN NNLDNLSQNF QDNFVQGTSG EVKTKFNEVC DDILQSTYKF  240
EYQMLESGLV DYFPGEFCMN CDDMNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.14e-56MYB family protein