PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN13463.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 272aa MW: 30789.3 Da PI: 5.4412 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.5e-17 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++lvd ++q G gtW+ ++ g+ R++k+c++rw +yl PIN13463.1 21 RGAWTAEEDKILVDFITQNGHGTWRNLPKLAGLPRCGKSCRLRWTNYL 68 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 44.6 | 3.3e-14 | 74 | 119 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r+++++ E+ +++++ lG++ W++Ia++++ gRt++++k+ w+++l PIN13463.1 74 RDPFSPNEENTIIHLHSTLGNK-WAAIASHLP-GRTDNDIKNLWNSHL 119 789*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MGKKRDKKGR KPCCEKEGIR RGAWTAEEDK ILVDFITQNG HGTWRNLPKL AGLPRCGKSC 60 RLRWTNYLRP DIRRDPFSPN EENTIIHLHS TLGNKWAAIA SHLPGRTDND IKNLWNSHLR 120 KRLSSNVINQ TSTSSKSVDT KCDFPSACQN ENVRRLEDEP CLASPQMLLN EPSEGDHFLR 180 FWNSEVEESF QSGNVNMSES QMSLFTKVES SPGGTSFSEM DDQKAEELAT YSDSSKSNEF 240 DDSLDAMMTM LLDFPVGGDD VEFLQGSNNQ LY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 7e-77 | MYB family protein |