PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13351.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 158aa MW: 17822.5 Da PI: 8.8066

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21	8.7e-07	69	91	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C k+F+++ L++H +H PIN13351.1 69 YQCEKCEKVFKSSQGLRSHKTSH 91 9******************9998 PP
2	zf-C2H2	12.7	0.0004	123	144	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +Cp Cgk F + L H r+H PIN13351.1 123 ECPFCGKIFGSAQALGGHKRSH 144 5*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MRSHYATLPL PPKTPQREEL NEPPADSTSS LLSEDLSEKE SASDHKPLVS VEEEDVALCL 60 IMLSKEKVYQ CEKCEKVFKS SQGLRSHKTS HYKKKMKNSL FDQIQIHKNE LKKMKIVEGK 120 VNECPFCGKI FGSAQALGGH KRSHYLISNF GAHKCFGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	6e-20	C2H2 family protein