PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13253.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 223aa    MW: 25244.8 Da    PI: 10.5003
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.46.7e-1374118347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+ l++ + ++lG g+W+ I+r + ++Rt+ q+ s+ qk+
       PIN13253.1  74 AWSEEEHRLFLLGLEKLGRGDWRGISRNFVTTRTPTQVASHAQKH 118
                      7******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MGLRKCSQCG KTGHNSRTCR GLNNQRMKLF GVELVNLPSS EDGKSFSFNP QEFLSSTHQD  60
SDKLYNGRRK KGVAWSEEEH RLFLLGLEKL GRGDWRGISR NFVTTRTPTQ VASHAQKHFL  120
RQKQANKNKH KLTFPSMVEG NEVQVRTHES STSIKMIPKS IPSTTDVCIN YSNKKPFISP  180
LFADMSYCRF FNYSATQTSP SLELSLAAAP PPQVAAWKKQ YVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.14e-38MYB_related family protein