PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13201.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 398aa MW: 43742.7 Da PI: 7.8579

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.8e-13	325	370	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ k + a++L +AveYIksLq PIN13201.1 325 SIAERVRRTRISERMKKLQELVPNM----EKQTNTADMLDLAVEYIKSLQ 370 689*******************7....467***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MYGDSPALSS DPTLIFPSNS KPKQEVALTE QQIFFMESDS NTNYTDYRQQ FLSGNQNNSG 60 ILRYRSAPTS LLSNFANGAE KSEILSSRFC SDEANSMHLL ENDESRGDIK GGVSRFSGMN 120 SQLPPQYPRQ NGAQMGYKVV GSMGSSLMRQ NSSPAGLFSH LTSQNGIGSY KLVDGGANGG 180 DLSPSTSRLK NHMNFSSGIP SMLSRITEVE NENGGATGLD EANVENRGGE NLFSSSGFPF 240 GSLLDSSHFA ENFRTGIKRE MDNDQNLFVN NQNGELGNRP HILSHHLSLP KTSAEIPAMD 300 KLLQLQDTVP CKVRAKRGCA THPRSIAERV RRTRISERMK KLQELVPNME KQTNTADMLD 360 LAVEYIKSLQ KQYKTLSDNC ANCKCSASQK VVNLNQTN

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MYGDSPALSS DPTLIFPSNS KPKQEVALTE QQIFFMESDS NTNYTDYRQQ FLSGNQNNSG  60
ILRYRSAPTS LLSNFANGAE KSEILSSRFC SDEANSMHLL ENDESRGDIK GGVSRFSGMN  120
SQLPPQYPRQ NGAQMGYKVV GSMGSSLMRQ NSSPAGLFSH LTSQNGIGSY KLVDGGANGG  180
DLSPSTSRLK NHMNFSSGIP SMLSRITEVE NENGGATGLD EANVENRGGE NLFSSSGFPF  240
GSLLDSSHFA ENFRTGIKRE MDNDQNLFVN NQNGELGNRP HILSHHLSLP KTSAEIPAMD  300
KLLQLQDTVP CKVRAKRGCA THPRSIAERV RRTRISERMK KLQELVPNME KQTNTADMLD  360
LAVEYIKSLQ KQYKTLSDNC ANCKCSASQK VVNLNQTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	6e-78	bHLH family protein