PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13108.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Nin-like

Protein Properties

Length: 637aa MW: 70155.1 Da PI: 7.2455

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.5	1.5e-29	274	325	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+++l++l++yFs+++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rki+++ PIN13108.1 274 AEKHVTLSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGISRWPSRKINKV 325 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MDNVCRALQA VDLSSTVPPR LYSQSLSKNQ KAALAEIKDV LRVICHTHRL PLALTWIPCS 60 YTKDTCHETI RPRVRGKNIG WSERSILCME QTACYYSDAN LQGFVHACGG HFLEEGQGIV 120 GKALQSNQPF FYRDVKEYNI SEYPLVHHAR KFGLNAAAAI RLRSSYTGDD DYILEFFLPV 180 NMQGSAEQQF LLNNLSTTMQ KICRSLRKVS DDELVRENDS KVVGESVIID NLNSVDRVSR 240 NTYELKPAET KDNGPPEQTI GGSSKQTEKK RSTAEKHVTL SVLQQYFSGS LKDAAKSLGV 300 CPTTLKRICR QHGISRWPSR KINKVNRSLK KIQRVLESVE GVEGGLKFNP TTGELVAAAS 360 SIIQDFEPGK SFYLTGQNHS ADQSDSVIQT VVSAPSTSCI TNVKNEGLCH FDVKPPVVES 420 CDESRLAALD TGPSWPASLS TMPWMTSPNA TTISQSCVPS GRSNSINFCI EIDDRLKGNT 480 MINRNDGVIE HSQPTSSGTT DSSNGSGLIM NGSSSGSGSL GEKTPSKTEA SCVDSGTKIS 540 VKATYRDDKI RFKLDPAAGC SELYAEVASR FKLHTDWFQL KYLDDEEEWV TLATDPDLLE 600 CLDVLELLGT RTVKFLIRDL PNVQVQRNAP GFGAARQ

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MDNVCRALQA VDLSSTVPPR LYSQSLSKNQ KAALAEIKDV LRVICHTHRL PLALTWIPCS  60
YTKDTCHETI RPRVRGKNIG WSERSILCME QTACYYSDAN LQGFVHACGG HFLEEGQGIV  120
GKALQSNQPF FYRDVKEYNI SEYPLVHHAR KFGLNAAAAI RLRSSYTGDD DYILEFFLPV  180
NMQGSAEQQF LLNNLSTTMQ KICRSLRKVS DDELVRENDS KVVGESVIID NLNSVDRVSR  240
NTYELKPAET KDNGPPEQTI GGSSKQTEKK RSTAEKHVTL SVLQQYFSGS LKDAAKSLGV  300
CPTTLKRICR QHGISRWPSR KINKVNRSLK KIQRVLESVE GVEGGLKFNP TTGELVAAAS  360
SIIQDFEPGK SFYLTGQNHS ADQSDSVIQT VVSAPSTSCI TNVKNEGLCH FDVKPPVVES  420
CDESRLAALD TGPSWPASLS TMPWMTSPNA TTISQSCVPS GRSNSINFCI EIDDRLKGNT  480
MINRNDGVIE HSQPTSSGTT DSSNGSGLIM NGSSSGSGSL GEKTPSKTEA SCVDSGTKIS  540
VKATYRDDKI RFKLDPAAGC SELYAEVASR FKLHTDWFQL KYLDDEEEWV TLATDPDLLE  600
CLDVLELLGT RTVKFLIRDL PNVQVQRNAP GFGAARQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-140	Nin-like family protein