PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN13077.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 252aa MW: 27900.4 Da PI: 8.8389 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 102.2 | 3.4e-32 | 48 | 103 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++ Y+eClkNhAa++Gg+++DGCgEfmps ge+gt +alkCaAC+CHRnFHR+e++ PIN13077.1 48 RISYRECLKNHAANIGGNVTDGCGEFMPS-GEDGTLEALKCAACNCHRNFHRKEHHG 103 689*************************9.999********************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MSLPGEDKDM RMQSLAYNIN SLENPQENKP RPSDPNSGGS KSKPTNPRIS YRECLKNHAA 60 NIGGNVTDGC GEFMPSGEDG TLEALKCAAC NCHRNFHRKE HHGEPTAMMH PLQLPPPLPS 120 PSLSQHRISG GAVHWSSMVH PMKMAAFGGG GGGGSAGTDS SSEELNFNAF HSNTVAPPPP 180 QFVTKKRFRT KFTSEQKERM LEFAEKLGWR IPREDDTEVQ RFCAEVGVKR QVFKVWMHNN 240 KSSSKKNIPQ EF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14440.1 | 2e-59 | ZF-HD family protein |