PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN13048.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 28883.6 Da PI: 4.977 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37 | 6.3e-12 | 76 | 122 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN + +Lr l+P++ +K++Ka+ L ++++ +k+L PIN13048.1 76 KSHSEAERRRRERINAHLMTLRGLVPNN-----EKMDKATLLAEVINQVKQL 122 58*************************8.....8*************99999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MYFENPYSLN FESDWGDLLN QSSQNVSGRT ENWGSGSKPV KESLVLDGEK GELEETSGRM 60 GKKSGASETK MIAALKSHSE AERRRRERIN AHLMTLRGLV PNNEKMDKAT LLAEVINQVK 120 QLKATATQAN EGLHIPMDAD EVEVEILKNN EDDGSFLLRA SLCCNYKPDL MYDLKQAIND 180 LPVQVLKCEL STLGGRLKSV FLITTREGDS DSVAGQELIV SSVRMALSNI LDKVTASAEY 240 DQELFYPQKR RRLSCFDAS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 87 | ERRRRE |
2 | 249 | 253 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25710.1 | 5e-33 | bHLH family protein |