PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN13013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 302aa MW: 35170.5 Da PI: 9.905 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.1 | 2e-18 | 34 | 79 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G+ +W++Ia++++ gR++k+c++rw++ PIN13013.1 34 RGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 79 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 57.8 | 2.5e-18 | 86 | 129 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++ +G++ W++I+r ++ gRt++ +k++w+ PIN13013.1 86 RRPFSEEEEERLLAAHRIHGNK-WALISRLFP-GRTDNAVKNHWHV 129 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MFKDISFRHI NLKLPMDETT CTGGSNDDSR TCPRGHWRPA EDEKLRQLVE QYGPQNWNSI 60 AEKLQGRSGK SCRLRWFNQL DPRINRRPFS EEEEERLLAA HRIHGNKWAL ISRLFPGRTD 120 NAVKNHWHVI MARKQREKSK LCGKRLTHQD HNHAISDPKS PTNYIFRRKN SRIQEDYGSR 180 ISFINGGVFD LHTQSKDKPF SCWPNNLSCY SSVVNSNHQN NFSIFSAYGD SNLAFETLNK 240 KRDISNTFNY LEYGIMNREL KSTVGENTLS FDKARTSMEQ LLEEKSVQKK DVPFIDFLGV 300 GR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 9e-65 | MYB family protein |