PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13008.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 481aa MW: 53131.4 Da PI: 7.9375

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00053	135	157	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cgk +++ ++ H ++ PIN13008.1 135 FECPVCGKGYTSEEEVSAHVESC 157 89*****************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MDEMRDKMRG LMKKVNSPFS SSSSSGKFKG QGRVLGSSSS STSSSPSQSL SSSSTSSNSR 60 PSTQRAHNVS QQKLENRKPE QKLENRKFEE KLESGKPEVR VNQNVGEKSE NGFDPFDSLI 120 TSGKRNSKGY SLQVFECPVC GKGYTSEEEV SAHVESCLSV SGSGNESGSK ESDFIGDRLQ 180 ASVSAYVSGK PSDGSVEVVM RLLRNVVKEP ENAKFRKIRM GNPKIKEAIG DVAGGVELLE 240 CIGFEWKEEG GEMWLVMDDP SQQRLGLVKN VIMLLEPKKA EEFPSPAPAK IEERIEPKKV 300 DRQVRVFFSV PESVAAKIEL PDSFYNLSAE ELKREADARK KKIEESKLLI PKSYREKQAK 360 AAKKQYKKTV IRIQFPDGVV LQAIFSPLEL TGALYEFVSS ALKDPSLEFE LLHPVLIKRR 420 VIPHFPAAGE RGVTLEDEDL VPAALIKFKP IETDEVVFTG LRNELLEISE PLVSASAVPP 480 S

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MDEMRDKMRG LMKKVNSPFS SSSSSGKFKG QGRVLGSSSS STSSSPSQSL SSSSTSSNSR  60
PSTQRAHNVS QQKLENRKPE QKLENRKFEE KLESGKPEVR VNQNVGEKSE NGFDPFDSLI  120
TSGKRNSKGY SLQVFECPVC GKGYTSEEEV SAHVESCLSV SGSGNESGSK ESDFIGDRLQ  180
ASVSAYVSGK PSDGSVEVVM RLLRNVVKEP ENAKFRKIRM GNPKIKEAIG DVAGGVELLE  240
CIGFEWKEEG GEMWLVMDDP SQQRLGLVKN VIMLLEPKKA EEFPSPAPAK IEERIEPKKV  300
DRQVRVFFSV PESVAAKIEL PDSFYNLSAE ELKREADARK KKIEESKLLI PKSYREKQAK  360
AAKKQYKKTV IRIQFPDGVV LQAIFSPLEL TGALYEFVSS ALKDPSLEFE LLHPVLIKRR  420
VIPHFPAAGE RGVTLEDEDL VPAALIKFKP IETDEVVFTG LRNELLEISE PLVSASAVPP  480
S