PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12975.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 273aa    MW: 30851.6 Da    PI: 7.737
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000195274123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  PIN12975.1 52 YSCSFCRREFRSAQALGGHMNVH 74
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MEQTRYWMWA KRKPDSNPHN MISSYGDSWE EQAFAEDAAG ALGGCVWPPR SYSCSFCRRE  60
FRSAQALGGH MNVHRRDRAR LKQSPINNPP TEVLPQNHDL HTCTPYSSEN ICTLLYNNNP  120
NPDRGPLVSV PLIRVSSPPD QEKTSTLSFF SPLVQKHDNW SSFVAGKRNR VLDSIKNEER  180
KAIIVEPDSR TEKEDCVTDD LSMNLNLKQA NTSSDDEVAS CKRRKIEAKP LSVFPKLSAV  240
DKCFSQSEVS KLRSGSNEEL DLELRLGEAP KVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-27C2H2 family protein