PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12614.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 286aa MW: 32394.5 Da PI: 9.9631

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	94.7	1.9e-29	56	145	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssgk 89 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WL+ k i++l+ ++ +++++ ss+ ++ ++++ PIN12614.1 56 FGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLNQPSKVVDWLIDVTKNDIDKLPPLPMLPSNFTqifH-PSSQDHFGAAKINN 145 689*************************************************************888887774421.22222222122221 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MTMDPKQKDI GSKKELDQDP NYKKTLPKIS PSSSSSSRQW SSSYKNPRIV RVSRAFGGKD 60 RHSKVCTVRG LRDRRIRLSV PTAIQLYDLQ DRLGLNQPSK VVDWLIDVTK NDIDKLPPLP 120 MLPSNFTQIF HPSSQDHFGA AKINNHQQEN QEGFGGFLGQ LSSQNLFPTN NQTPFPNFVY 180 SNPNFFPWDP SNLSLSQFGV GFSENHQPSD NLPTLFPYLC PSSTNIPSYI TPSMDNDLRQ 240 VNQSPLLPTT LHLISPPTKS FMNPKNVHAS QEKDTQEKDK FLKIPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	3e-46	TCP family protein