PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12528.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

CPP

Protein Properties

Length: 914aa MW: 99299.5 Da PI: 6.9311

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.8	2.9e-15	500	538	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkks+Clk+YC+Cfaag +C+e C C++C N+ e PIN12528.1 500 CKRCNCKKSQCLKLYCDCFAAGIYCAEPCACQGCYNRPE 538 79**********************************876 PP
2	TCR	50.2	5.3e-16	587	625	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+Ce+CkN PIN12528.1 587 RHKRGCNCKKSMCLKKYCECYQAKVGCSDGCRCEGCKNV 625 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 914 aa Download sequence
MDSPKSCKPT TTNTFAPETV PAQESPVFSY ISNLSPIQPV KPPPVTQGFP GLNSPPLVFT 60 SPRLNPHSQP NFHKRAQLQG LSAAKLSGQD EGCKNNIPAV NASENLDVQL HTSQITCNKK 120 ESYGRNSVDD QTESPTGCSD QFLTDIVDMD SVDPNVPSDS TVKKSEIIDL PPDAVTVTRE 180 IEDVHKEDAS TEFSSVETDL KKGDTVSVNH SPKLESELPV DHALTNQSQD SIIETVEAEW 240 AGSRDLSSCS GSTQTEKENE DYVEATGQLS TEPVQKKVRS NPEAFQLRGV RRRCLQFENA 300 MQSNQPAENP SDSGGPKSLS VGTPSTPICP KQADTIQPLY PRNTNSTIKI PKPSGIGLHL 360 NSIVNAVQAG SGAVVHVKSA QMGNFSIRGK KSIPIINSHL SDASKSSSVF PLAENVSAST 420 DDNRHESHAS MAVNSANSLS TFMVKPSNDS VVLNPVEYQS TPGNKRKHND TETIGSSGEL 480 KSSPKKKRKK TSDSGDGDGC KRCNCKKSQC LKLYCDCFAA GIYCAEPCAC QGCYNRPEYE 540 DTVIETRQQI ESRNPLAFAP KVVQNNVEPL ASSYGEDGTH FTPSSARHKR GCNCKKSMCL 600 KKYCECYQAK VGCSDGCRCE GCKNVYGRKG EHGMVKDVLS KEGTNERTDS SFIEQMVASG 660 NSLYQTELCN PHNLTPLTPA VQFLNHRKDA SAAWFQSGEY FQSPGSNLSS VAPYMMSPRS 720 PRDSINNGMI SEKFLDLVDR ELCYGNAETA DELVSVCHQP GKPGNLSGIR NPQEWANNSK 780 DQSFSGSKQY SSTSYHWHGS PNTPMAQFSG TKDLKVVELD GDLSNIMHDD TPDILKDCPT 840 PVNAVKVSSP NKKRISPPHS RHHDISSSSS HGVRTGRKFI LKAVPSFPPL TPCIASKDAP 900 AQQKNDPQNC TQNK

Sequence ? help Back to Top

Protein Sequence Length: 914 aa Download sequence

MDSPKSCKPT TTNTFAPETV PAQESPVFSY ISNLSPIQPV KPPPVTQGFP GLNSPPLVFT  60
SPRLNPHSQP NFHKRAQLQG LSAAKLSGQD EGCKNNIPAV NASENLDVQL HTSQITCNKK  120
ESYGRNSVDD QTESPTGCSD QFLTDIVDMD SVDPNVPSDS TVKKSEIIDL PPDAVTVTRE  180
IEDVHKEDAS TEFSSVETDL KKGDTVSVNH SPKLESELPV DHALTNQSQD SIIETVEAEW  240
AGSRDLSSCS GSTQTEKENE DYVEATGQLS TEPVQKKVRS NPEAFQLRGV RRRCLQFENA  300
MQSNQPAENP SDSGGPKSLS VGTPSTPICP KQADTIQPLY PRNTNSTIKI PKPSGIGLHL  360
NSIVNAVQAG SGAVVHVKSA QMGNFSIRGK KSIPIINSHL SDASKSSSVF PLAENVSAST  420
DDNRHESHAS MAVNSANSLS TFMVKPSNDS VVLNPVEYQS TPGNKRKHND TETIGSSGEL  480
KSSPKKKRKK TSDSGDGDGC KRCNCKKSQC LKLYCDCFAA GIYCAEPCAC QGCYNRPEYE  540
DTVIETRQQI ESRNPLAFAP KVVQNNVEPL ASSYGEDGTH FTPSSARHKR GCNCKKSMCL  600
KKYCECYQAK VGCSDGCRCE GCKNVYGRKG EHGMVKDVLS KEGTNERTDS SFIEQMVASG  660
NSLYQTELCN PHNLTPLTPA VQFLNHRKDA SAAWFQSGEY FQSPGSNLSS VAPYMMSPRS  720
PRDSINNGMI SEKFLDLVDR ELCYGNAETA DELVSVCHQP GKPGNLSGIR NPQEWANNSK  780
DQSFSGSKQY SSTSYHWHGS PNTPMAQFSG TKDLKVVELD GDLSNIMHDD TPDILKDCPT  840
PVNAVKVSSP NKKRISPPHS RHHDISSSSS HGVRTGRKFI LKAVPSFPPL TPCIASKDAP  900
AQQKNDPQNC TQNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	480	489	LKSSPKKKRK
2	486	490	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	3e-57	CPP family protein