PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12353.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YA
Protein Properties Length: 307aa    MW: 33811.2 Da    PI: 9.5872
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.61.8e-32167223158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hAlrR+RgsgGrF
  PIN12353.1 167 QEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHQHALRRARGSGGRF 223
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MQSKSQGGNQ GEPNLYNVPN SNVYPDSWWN NTGYNSFPTT MMRGNASDSS SLEQSADGQS  60
QSEGAMNEED DDTTKGSPST TPVQPDRNYR PEGLDLQQVP LNIHPRNNGN LNQAPQLELV  120
GHSVACGSNP YYPYYGGMMA AYGQPLVPPH LYDMHHARMP LPLEMTQEPV YVNAKQYHGI  180
LRRRQSRAKA ELEKKLIKVR KPYLHESRHQ HALRRARGSG GRFAKKSGAD TSKGTGSGSS  240
ISSQFIGSSG GSKPAPEPRN LYNTDDDNFR KQTNLREPAH QSGKTGEGPT SSHKWGNITS  300
NRALAMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.15e-45NF-YA family protein