PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12303.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 433aa MW: 47075.4 Da PI: 6.5147

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.8	6.1e-06	323	361	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L PIN12303.1 323 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 361 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MADDQFQMGS GNWWDTSRNR SYDGGTTPSS ISTTLNAIAT TFGWPTQMLD MKPSSSMDPA 60 TPSAATAHDH QSPGSTGGGG VLDNPNLQLM GLGLSSHSMD WNQTLFRGEK AESSFRSLLQ 120 EDMSSTSGYQ QESGPAGSSS QEHWRQKLSD ENEFKQINRG FSLDQPQYSS QASSNDSTIT 180 SQNLNSGFQG DSAAAYGFLL SENRPMNYSY PSSGYGGELV PSWNKYQQFL RTSPPPPPSA 240 AVGGHLHYSN NNSLWNASPT AANDARSSFF PALQTQINTA ASSYDEKPKN PSDLGATTKK 300 NNTETSNKRP RNETPSPLPA FKVRKEKMGD RITALQQLVS PFGKTDTASV LSEAIEYIKF 360 LHGQVSALAT PYMKNGAPTQ HHHQDSDKSK DSEGPRHDLR SRGLCLVPVS STFPVTHETA 420 VDFWSPTFGG SFR

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MADDQFQMGS GNWWDTSRNR SYDGGTTPSS ISTTLNAIAT TFGWPTQMLD MKPSSSMDPA  60
TPSAATAHDH QSPGSTGGGG VLDNPNLQLM GLGLSSHSMD WNQTLFRGEK AESSFRSLLQ  120
EDMSSTSGYQ QESGPAGSSS QEHWRQKLSD ENEFKQINRG FSLDQPQYSS QASSNDSTIT  180
SQNLNSGFQG DSAAAYGFLL SENRPMNYSY PSSGYGGELV PSWNKYQQFL RTSPPPPPSA  240
AVGGHLHYSN NNSLWNASPT AANDARSSFF PALQTQINTA ASSYDEKPKN PSDLGATTKK  300
NNTETSNKRP RNETPSPLPA FKVRKEKMGD RITALQQLVS PFGKTDTASV LSEAIEYIKF  360
LHGQVSALAT PYMKNGAPTQ HHHQDSDKSK DSEGPRHDLR SRGLCLVPVS STFPVTHETA  420
VDFWSPTFGG SFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	6e-76	bHLH family protein