PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12299.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 332aa MW: 36072.3 Da PI: 7.421

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.9	0.00042	197	235	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq PIN12299.1 197 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 235 6677889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MNQGVVQSSP VQQMVAAGGW SINNMRPPPL HQHHSFVAAP SYHHLAPPSV IAASSWNDSQ 60 DLPPSWSQLL LGGLVGEEDK PASLSHMQAR KLEIWDQHLN FQTSNGSVDL KKENSDSSNT 120 YGVVKHSTNN SWSPHHQMVS ASSPNSCVTT LSNNVKSADG KHPHQDLSSE CNSTATGGLA 180 KKPRIQPSLA QSTFKVRKEK LGDRITALHQ LVSPFGKTDT ASVLLEAIGY IRFLQSQIEA 240 LSSPYLGTGS GSIRQRHPIQ GERNCLFPED PGQLLHENCI KRKGVSDLEC NEEPKKDLRS 300 RGLCLVPISC TLDVGSENGA DYWASAFGAN FP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	1e-87	bHLH family protein