PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12183.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 394aa MW: 43912.3 Da PI: 5.509

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12183.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.5	1.3e-09	206	253	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PIN12183.1 206 SHSLAERVRREKISERMKFLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 253 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MNSGLLEMLH YSQNNEMGIT YFNENEQFGL GGAFMALNSD QGPSGLLLNG AMKPEPCLEN 60 GWSDDFRRIL SYENVSSTIP RTLSCPPDVE APMAEAVVGK GKEVVSSFSS SATGRESSKK 120 RKADKTQHLK VVAEEKTEEK KMKVCEEEES KITEQNSNTK STTTTATNSK NTKGGSANTK 180 ENSKVSEAPK ADYIHVRARR GQATDSHSLA ERVRREKISE RMKFLQDLVP GCNKITGKAG 240 MLDEIINYVQ SLQRQVEFLS MKLAAINPRL DFDDDNYLVK EDFLACTSNI PPAPSEMVNH 300 THLQFNTLVQ GVQGSSLNMV ENPMEGMLRR TISAPISIPH TFLDSSNLNQ IQHLTWEDEL 360 QNIYSTEYQQ GRSTSFISQP FSGLFEANQV KMEM

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MNSGLLEMLH YSQNNEMGIT YFNENEQFGL GGAFMALNSD QGPSGLLLNG AMKPEPCLEN  60
GWSDDFRRIL SYENVSSTIP RTLSCPPDVE APMAEAVVGK GKEVVSSFSS SATGRESSKK  120
RKADKTQHLK VVAEEKTEEK KMKVCEEEES KITEQNSNTK STTTTATNSK NTKGGSANTK  180
ENSKVSEAPK ADYIHVRARR GQATDSHSLA ERVRREKISE RMKFLQDLVP GCNKITGKAG  240
MLDEIINYVQ SLQRQVEFLS MKLAAINPRL DFDDDNYLVK EDFLACTSNI PPAPSEMVNH  300
THLQFNTLVQ GVQGSSLNMV ENPMEGMLRR TISAPISIPH TFLDSSNLNQ IQHLTWEDEL  360
QNIYSTEYQQ GRSTSFISQP FSGLFEANQV KMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	2e-54	bHLH family protein