PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN12179.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 87aa MW: 9687.84 Da PI: 9.1821 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.7 | 4.2e-11 | 13 | 59 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT+ E + + +a + + ++ +W+ +ar +g gRt++++k ++ ++ PIN12179.1 13 SWTAKENKAFEKALAVFDKDtpdRWDNVARAVG-GRTPEEVKRHYETL 59 7********************************.***********876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
MASSSMTQGS GRSWTAKENK AFEKALAVFD KDTPDRWDNV ARAVGGRTPE EVKRHYETLI 60 EDIKCIESGH VPFPKYRTTG GGSNMPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 9e-39 | MYB_related family protein |