PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN12147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 276aa MW: 31110.6 Da PI: 6.5036 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.2 | 1.2e-15 | 17 | 63 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+W++ Ed++l++ ++++G +W++ ++ g+ R++k+c++rw +yl PIN12147.1 17 GPWSPAEDLRLINFIQKHGHSNWRALPKQAGLLRCGKSCRLRWINYL 63 79*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T+eE++ +++++ +G++ W++Ia++++ gRt++++k+ w+++l PIN12147.1 69 RGDFTPEEEQTIINLHSSFGNK-WSKIASHLP-GRTDNEIKNLWNTHL 114 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MGKGRAPCCD KSKVRAGPWS PAEDLRLINF IQKHGHSNWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG DFTPEEEQTI INLHSSFGNK WSKIASHLPG RTDNEIKNLW NTHLKKRLLT 120 GNSTSADNCN KTQAKHSITD YSASSSCAST SVTSDSPSTS CASNYENIII PTDFDTDFWE 180 FVESLDPLLQ STRTEQNDLN QIFNDAPIIA ENVDIQQAEF RNSLRHLEKE LGLTSDDGDR 240 PPFKDQEMNL DSEVICSHAW EWDCSTSRSP PRALAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16490.1 | 1e-73 | MYB family protein |