PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN12106.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 202aa MW: 23838.3 Da PI: 10.2187 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll +++ ++G g W++++ + g++R++k+c++rw++yl PIN12106.1 18 KGAWTKEEDILLRNCIDKYGEGKWHLVPLRAGLNRCRKSCRLRWLNYL 65 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.4 | 7.9e-14 | 71 | 115 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +Tt+E +l+++++k+ G++ W +Ia +++ gRt++++k++w+++ PIN12106.1 71 RGHFTTDEVDLIIRLHKLQGNR-WPLIAGRIP-GRTANDVKNFWNTH 115 899*******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MEGLRDTMES NIPKGVRKGA WTKEEDILLR NCIDKYGEGK WHLVPLRAGL NRCRKSCRLR 60 WLNYLRPTNK RGHFTTDEVD LIIRLHKLQG NRWPLIAGRI PGRTANDVKN FWNTHIQKKI 120 IKKTTFSTYR NIIRPQPHFP ALHRLRERFI TDHQQNSEEK QENKEPPSSS GEEVDECIRW 180 WTKLLQTTDE NIGDCANLRS IC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 4e-60 | MYB family protein |