PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11986.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 1714aa MW: 187961 Da PI: 5.3893

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.6	7.6e-10	829	870	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE e+++d + +G++ +++Ia+ + ++t +c+++++k PIN11986.1 829 PWTPEEREIFIDKLATFGKD-FSKIASFLD-HKTTADCIEFYYK 870 8***************99.*****.*********98 PP
2	Myb_DNA-binding	29.7	1.5e-09	1045	1085	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE +++av+ +G++ +k I++++ +++ qck ++ PIN11986.1 1045 DWTDEEKSFFIQAVTSYGKD-FKMISQCVR-TKSMDQCKVFFS 1085 5***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1714 aa Download sequence
MPPEPLPWDR RDFRKHERSG SDPRLGGGFG GGGPHRWREQ QHHHPHAPPP HPPPYHHQQQ 60 QRWYSDFRSS RPLAPGHGKQ GGWHTYPDDG GNGFIPFGSR NGDRNFEDEN WRLFGSRSDG 120 RYFRNSRENR PFTQKEWKNP SWERAASLSG PGKPMSEVNN VRSTENTQTC HNSSSSKSSE 180 TSRPTSNSVS LADQSQPQSS VKEKNDKNGD PADGPTSTGQ KSEKENCLGS IDWEPLKWTR 240 SGSLSSRGSG FSHSSSSKSM PVDSIETVEV QPKNATPVQS PPADAAALVV STAPAQLDET 300 SSRKKPRLGW GEGLAKYEKK KVEGPEDGAT KNELVLSVSN AETLQSNAAN LLEKSPRVAS 360 LSDCASPATP SSVACSSSPG IEEKESIKEA NVGHDATNSS CSPSIMSQTL YDGPPLDLEN 420 LELASIANLS SSIDELLQSD DPSSMETHYA RTTSINKLLL WKVDMSKALE MTESEIDSLE 480 TELKSLTAEP RLAHPADSSS LTAECQLKPC EEVVTASKSA SRPAPLQIVS SGETIVEDSP 540 IAQPDEQVVS KDEDIDSPGS ATSKYVEVLS AKEDLFPSET AVYLEGPMNL DVSSSSNLDE 600 TCPKNGLNDK TNSGCLDNHV VTRATNCEDF ASLTSSHCDV DSIYKSILSS NKDSAKRALE 660 ELNKLLPAEQ CPFDTSTVSS VYSSEVDSSV VKEKFLMRKR YLQFKEKVLT IKFNVFQHFW 720 KEGRLVSLRK LRGKAQKKFD PGRNGFKKNR FSSRSRISYA GGPQTVPADE VIEFVNGLLS 780 ESAFKPYRST LKMPALILDK DTKMSRFISN NGLVEDPCVI EKERSMINPW TPEEREIFID 840 KLATFGKDFS KIASFLDHKT TADCIEFYYK NHKSDSFEKT RKNPDFMKQR KSQTTTYLVT 900 SGKRRNRESN AAALDILGAA SEIVANVNDG VENQKKCTSR CFVGASSSYR ARGDDGPLQR 960 LNSMDLYSNE RETVAADVLA GICVSLSSEA MSSCITSSVD PGEGYQDWRC QKIGSSMKRP 1020 LTPEVTQNVD DECSDESCGE LDPTDWTDEE KSFFIQAVTS YGKDFKMISQ CVRTKSMDQC 1080 KVFFSKARKC LGLDLIQPGP GTVSPDVNGG DSDIEDGCAV ESGSVICNNG SECKMDGDLT 1140 PLDKKLNYES DIVGASNFTP DSKISEANNG LGPFAPMDAE PVSNNSSRDD SEVDEKPVTG 1200 YHADIRKQNG ADDSFASVKE HGTMVLSSNM NSEQGAEKED DISLKDGQSE AEKMTSVEAS 1260 DGHCGEENIR QEFLLPDENL KAVEDRDANS SEGSDISSAV SEMKSEPQLA GNLPHPSIEA 1320 HSSLQIDTEK SCMSSVKQNG HSVSMKSSML FSVPIKYYNN PNHNALLDVG ASGISDGHSP 1380 TVVKTVDCQQ HLSGHPLSDS KEPSQILRGY PVSVHTRKEV NGDANCERFV AHQNVLKRDE 1440 NLHSNQPREF FLEKCNGSRQ QSRVIESPCP PSREQSRDHP RPLSGCSSSV DKPSRNGDVK 1500 LFGKILVSSQ QKPDSSTQRD DHNTQDREAS CQSLNLKLGP DQKVNIDCNN YVGSEKMPVR 1560 SFGFWDGGRI QTGYPPLPDS ALLLSKYPAA FSAGKLEQPP LHGVIKSNNG LVDYPVWRNR 1620 ELQPFPLDMK QQQDALFTEM QRRNGGYDVA SGLQHQAQGM LGINIVGRGG VCSGVSDPVA 1680 AIKMHYAKAE QLNVQGANCI RDDDRWRSNG DVGR

Sequence ? help Back to Top

Protein Sequence Length: 1714 aa Download sequence

MPPEPLPWDR RDFRKHERSG SDPRLGGGFG GGGPHRWREQ QHHHPHAPPP HPPPYHHQQQ  60
QRWYSDFRSS RPLAPGHGKQ GGWHTYPDDG GNGFIPFGSR NGDRNFEDEN WRLFGSRSDG  120
RYFRNSRENR PFTQKEWKNP SWERAASLSG PGKPMSEVNN VRSTENTQTC HNSSSSKSSE  180
TSRPTSNSVS LADQSQPQSS VKEKNDKNGD PADGPTSTGQ KSEKENCLGS IDWEPLKWTR  240
SGSLSSRGSG FSHSSSSKSM PVDSIETVEV QPKNATPVQS PPADAAALVV STAPAQLDET  300
SSRKKPRLGW GEGLAKYEKK KVEGPEDGAT KNELVLSVSN AETLQSNAAN LLEKSPRVAS  360
LSDCASPATP SSVACSSSPG IEEKESIKEA NVGHDATNSS CSPSIMSQTL YDGPPLDLEN  420
LELASIANLS SSIDELLQSD DPSSMETHYA RTTSINKLLL WKVDMSKALE MTESEIDSLE  480
TELKSLTAEP RLAHPADSSS LTAECQLKPC EEVVTASKSA SRPAPLQIVS SGETIVEDSP  540
IAQPDEQVVS KDEDIDSPGS ATSKYVEVLS AKEDLFPSET AVYLEGPMNL DVSSSSNLDE  600
TCPKNGLNDK TNSGCLDNHV VTRATNCEDF ASLTSSHCDV DSIYKSILSS NKDSAKRALE  660
ELNKLLPAEQ CPFDTSTVSS VYSSEVDSSV VKEKFLMRKR YLQFKEKVLT IKFNVFQHFW  720
KEGRLVSLRK LRGKAQKKFD PGRNGFKKNR FSSRSRISYA GGPQTVPADE VIEFVNGLLS  780
ESAFKPYRST LKMPALILDK DTKMSRFISN NGLVEDPCVI EKERSMINPW TPEEREIFID  840
KLATFGKDFS KIASFLDHKT TADCIEFYYK NHKSDSFEKT RKNPDFMKQR KSQTTTYLVT  900
SGKRRNRESN AAALDILGAA SEIVANVNDG VENQKKCTSR CFVGASSSYR ARGDDGPLQR  960
LNSMDLYSNE RETVAADVLA GICVSLSSEA MSSCITSSVD PGEGYQDWRC QKIGSSMKRP  1020
LTPEVTQNVD DECSDESCGE LDPTDWTDEE KSFFIQAVTS YGKDFKMISQ CVRTKSMDQC  1080
KVFFSKARKC LGLDLIQPGP GTVSPDVNGG DSDIEDGCAV ESGSVICNNG SECKMDGDLT  1140
PLDKKLNYES DIVGASNFTP DSKISEANNG LGPFAPMDAE PVSNNSSRDD SEVDEKPVTG  1200
YHADIRKQNG ADDSFASVKE HGTMVLSSNM NSEQGAEKED DISLKDGQSE AEKMTSVEAS  1260
DGHCGEENIR QEFLLPDENL KAVEDRDANS SEGSDISSAV SEMKSEPQLA GNLPHPSIEA  1320
HSSLQIDTEK SCMSSVKQNG HSVSMKSSML FSVPIKYYNN PNHNALLDVG ASGISDGHSP  1380
TVVKTVDCQQ HLSGHPLSDS KEPSQILRGY PVSVHTRKEV NGDANCERFV AHQNVLKRDE  1440
NLHSNQPREF FLEKCNGSRQ QSRVIESPCP PSREQSRDHP RPLSGCSSSV DKPSRNGDVK  1500
LFGKILVSSQ QKPDSSTQRD DHNTQDREAS CQSLNLKLGP DQKVNIDCNN YVGSEKMPVR  1560
SFGFWDGGRI QTGYPPLPDS ALLLSKYPAA FSAGKLEQPP LHGVIKSNNG LVDYPVWRNR  1620
ELQPFPLDMK QQQDALFTEM QRRNGGYDVA SGLQHQAQGM LGINIVGRGG VCSGVSDPVA  1680
AIKMHYAKAE QLNVQGANCI RDDDRWRSNG DVGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-139	MYB family protein