PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11980.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 351aa MW: 40519.6 Da PI: 10.2717

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11980.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.4	8.8e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++ +m+ + R k+c +rw +yl PIN11980.1 4 RQRWRPEEDALLRAYVKQYGPREWHLVSDRMNkpLSRDSKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	35.8	1.9e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia+ ++ gRt+k + +w + PIN11980.1 59 KGSLTEEEQRLVIHLQAKHGNK-WKKIAADVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MKERQRWRPE EDALLRAYVK QYGPREWHLV SDRMNKPLSR DSKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IHLQAKHGNK WKKIAADVPG RTAKRLGKWW EVFKEKQQRQ RKENNKIIEP 120 IQQGKYNHIL ETFAEKLVKE RITMASTNGE FLYSDTPPPS APASVLPPWL ASSSLTATIR 180 PPSPSVTLSL SPSAIPPAPA IGWLQTDHRF PKNISPSLGI APTLGDNNPM LTELLECCRE 240 LEEGHRALTA HRNEAAWRLK RLELQLESEK ASRRKEKMED IEAKVKALRE EQRAILDRIE 300 AEYREQLAGL RREAEVKEQK LAEQWAAKHL RLTKFLEQMG CRTIASEPNG R

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MKERQRWRPE EDALLRAYVK QYGPREWHLV SDRMNKPLSR DSKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IHLQAKHGNK WKKIAADVPG RTAKRLGKWW EVFKEKQQRQ RKENNKIIEP  120
IQQGKYNHIL ETFAEKLVKE RITMASTNGE FLYSDTPPPS APASVLPPWL ASSSLTATIR  180
PPSPSVTLSL SPSAIPPAPA IGWLQTDHRF PKNISPSLGI APTLGDNNPM LTELLECCRE  240
LEEGHRALTA HRNEAAWRLK RLELQLESEK ASRRKEKMED IEAKVKALRE EQRAILDRIE  300
AEYREQLAGL RREAEVKEQK LAEQWAAKHL RLTKFLEQMG CRTIASEPNG R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	2e-83	MYB family protein