PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN11795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 258aa MW: 29319.7 Da PI: 9.3993 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++++G g W+ ++ + g++R++k+c++rw++yl PIN11795.1 11 KGAWTKEEDDRLKKCIEKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYL 58 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.4 | 2.2e-15 | 64 | 108 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T +E +l+v+++k+lG++ W++Ia +++ gRt++++k++w+++ PIN11795.1 64 RGYFTRDEVDLIVRLHKLLGNR-WSLIAGRLP-GRTANDVKNFWNTH 108 799*******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MENNKRVGVR KGAWTKEEDD RLKKCIEKYG EGKWHQVPLR AGLNRCRKSC RLRWLNYLRP 60 NIKRGYFTRD EVDLIVRLHK LLGNRWSLIA GRLPGRTAND VKNFWNTHIQ KNINSAGADR 120 SKKNSAGAGL VLGGETEKTT TESNIIRPRP RSFSTLQVLG CPSITDHQQS KLNSENPNDK 180 QQPSFSTASL SQDQDTINDS TNDPDECIRW WSNLLEITET GKRPPFSFSN EDYQIILSSG 240 LGDASDYTDQ DGTFSSYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 4e-63 | MYB family protein |