PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11347.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 301aa    MW: 35425.8 Da    PI: 4.2843
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.71.3e-1272154286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W+++e  +L+e+  e+  +l+r++l++ +W +v +k+ +  g+er+ ++C++ ++ l+++ykk+k+  +++   + s++p+f++++
  PIN11347.1  72 WSEEESFVLLEVWGERYMELGRRSLRGEDWIDVTEKIaEMIGVERTEVECRNQLDVLKNKYKKEKAKVESG---HWSKWPFFKKMD 154
                 *************************************5558*************************99986...7889*******7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MKTPNSYTYR SHNAIEYDDE DNDFDENEEN PDQNLTPNGN FYNYEDSKRH PKKRKLESFV  60
SSYELPPRRE IWSEEESFVL LEVWGERYME LGRRSLRGED WIDVTEKIAE MIGVERTEVE  120
CRNQLDVLKN KYKKEKAKVE SGHWSKWPFF KKMDVLLNTK NRGHIGLGCG VDSGEYVFMN  180
PRVYLDRSNV LDEMRDSPAQ SDEDNGGDDD NEDLEGDDDN GESARLLADS IQKFGQIYEK  240
IEESKRKQMM ELETMRQDFQ RELELQKKQI VERAQAEIAK MRGMDDDEDD NTDTSEENFG  300
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.16e-73Trihelix family protein