PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11190.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

CO-like

Protein Properties

Length: 369aa MW: 41528.2 Da PI: 5.3297

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.1	7.3e-08	13	55	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 + C+ ++e ++ l+C+ ++ lC +C e H+ H++ PIN11190.1 13 DPLCDFCNESKALLYCRADSAKLCLNCDREVHSTnqlfkkHNR 55 689****99*******************66777777776 PP
2	zf-B_box	28	4.5e-09	56	99	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....Htvvpl 42 C+ +++ + ++fC +++ lC++C e+Hk+ H+++p+ PIN11190.1 56 SLLCNSCNSSPSSIFCCTDSAVLCQNCDWETHKSfrsvHDRRPI 99 568***************************9999999886 PP
3	CCT	60.7	4.9e-21	325	367	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R+ a++RYkeK+ktR++eK+irYesRK++AesR R+KGrF+k PIN11190.1 325 RDSAISRYKEKKKTRRYEKHIRYESRKVRAESRTRIKGRFAKM 367 899**************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MTELDQENHN QTDPLCDFCN ESKALLYCRA DSAKLCLNCD REVHSTNQLF KKHNRSLLCN 60 SCNSSPSSIF CCTDSAVLCQ NCDWETHKSF RSVHDRRPIE GFNGCPSVSE LLNFLGLDDF 120 GKKNLGFDDE NDEGLLDMLV WETPSIVSLD DLIVSNDGGD SGRSFQAMGV PPLPKNRNAV 180 CGKHKEDILY QLREMAKTEP NFSGSLEDLE PNIGFQSQEL GNCQVKDSCH AGENNPEPLS 240 VPLYETSARR WGDFNGGVSD EHLPSTFGGS FIEMNHLVPD KDSDVGDSTG IVSGFQEIQS 300 HVPEDSKNFQ VLPKAAAREL NSQERDSAIS RYKEKKKTRR YEKHIRYESR KVRAESRTRI 360 KGRFAKMDR

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MTELDQENHN QTDPLCDFCN ESKALLYCRA DSAKLCLNCD REVHSTNQLF KKHNRSLLCN  60
SCNSSPSSIF CCTDSAVLCQ NCDWETHKSF RSVHDRRPIE GFNGCPSVSE LLNFLGLDDF  120
GKKNLGFDDE NDEGLLDMLV WETPSIVSLD DLIVSNDGGD SGRSFQAMGV PPLPKNRNAV  180
CGKHKEDILY QLREMAKTEP NFSGSLEDLE PNIGFQSQEL GNCQVKDSCH AGENNPEPLS  240
VPLYETSARR WGDFNGGVSD EHLPSTFGGS FIEMNHLVPD KDSDVGDSTG IVSGFQEIQS  300
HVPEDSKNFQ VLPKAAAREL NSQERDSAIS RYKEKKKTRR YEKHIRYESR KVRAESRTRI  360
KGRFAKMDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	9e-79	CO-like family protein