PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11171.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 754aa MW: 83740.1 Da PI: 6.5101

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22	3.8e-07	50	92	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I +++ + q++++++ + PIN11171.1 50 AWTRQEEESFFAALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 92 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 754 aa Download sequence
MVSQVPLDCE LCLDPASLGS KDGDASVPSS SQEQAAPQMP VKKQTRQWAA WTRQEEESFF 60 AALRQVGKNF EKITCRVQSK NKDQVRHYYY RLVRRMNKLL GPELCLDAKN SKDTNAAMLR 120 WWSLLEKYSC KASKLHLKPR RFKIFVETLE NQLLKDRKKN IKKRVSSGEN NSSIPNISAA 180 NHVRASGHDN RAVKMVLVDS QNIQKVGSGK GALFKRNVNI GPNGKVDPAS VKTAKHRRKG 240 GLASAAAYRR WEKAAIAGVS LVADAAEHLE RVDTDKEIEH VQETPGHDGS QLVGKEVHSL 300 QTSSPSMLNE NIVQNSTKLK LQLFPIDECT RKALEMDHHN PHLELTLSTR KKISSVIEHL 360 NRKWGNSSLL SQELMLFPYW AQRENLVGYQ KWTKDSPLCA ADVYYLIGRP SIFRLRVFYS 420 NLDTDEFNAE TTENTSIPCN DQLVSAKQII APRPLSTSNP MKAVDCGVSV SDINISRYHD 480 SLAVVSSFGE ENGDLAVTRQ VESTKDVALS AAEWADTLTN ISVGDLLSES TENMDINCTE 540 FPVPLGSNSP QQIPFSCDSF DAAIAAHIYK QQNKIDSQQG LVSHVPSIWD AEETCDAFAF 600 QKPNAFCNKD QNASMNDSLD AFKQAIMTSP SASHKEVEEL PEMEKLTNSN CTYGDVVDDC 660 RPDHPSENPT KDFSGLSDIY WPDSLGALDL DIPSCRYHNN DLILSDSLGG LNRLIANSLD 720 AFQNCSFLGL DKKEPASTAE AHQTASLSDF KIGS

Sequence ? help Back to Top

Protein Sequence Length: 754 aa Download sequence

MVSQVPLDCE LCLDPASLGS KDGDASVPSS SQEQAAPQMP VKKQTRQWAA WTRQEEESFF  60
AALRQVGKNF EKITCRVQSK NKDQVRHYYY RLVRRMNKLL GPELCLDAKN SKDTNAAMLR  120
WWSLLEKYSC KASKLHLKPR RFKIFVETLE NQLLKDRKKN IKKRVSSGEN NSSIPNISAA  180
NHVRASGHDN RAVKMVLVDS QNIQKVGSGK GALFKRNVNI GPNGKVDPAS VKTAKHRRKG  240
GLASAAAYRR WEKAAIAGVS LVADAAEHLE RVDTDKEIEH VQETPGHDGS QLVGKEVHSL  300
QTSSPSMLNE NIVQNSTKLK LQLFPIDECT RKALEMDHHN PHLELTLSTR KKISSVIEHL  360
NRKWGNSSLL SQELMLFPYW AQRENLVGYQ KWTKDSPLCA ADVYYLIGRP SIFRLRVFYS  420
NLDTDEFNAE TTENTSIPCN DQLVSAKQII APRPLSTSNP MKAVDCGVSV SDINISRYHD  480
SLAVVSSFGE ENGDLAVTRQ VESTKDVALS AAEWADTLTN ISVGDLLSES TENMDINCTE  540
FPVPLGSNSP QQIPFSCDSF DAAIAAHIYK QQNKIDSQQG LVSHVPSIWD AEETCDAFAF  600
QKPNAFCNKD QNASMNDSLD AFKQAIMTSP SASHKEVEEL PEMEKLTNSN CTYGDVVDDC  660
RPDHPSENPT KDFSGLSDIY WPDSLGALDL DIPSCRYHNN DLILSDSLGG LNRLIANSLD  720
AFQNCSFLGL DKKEPASTAE AHQTASLSDF KIGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein