PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10912.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 601aa MW: 70068.4 Da PI: 9.2519

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10912.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.6	3.7e-22	11	94	1	86
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 kfYneYA+ +GFs+rk++ ++ +g+i++rtf+C ++g+r+++k++ + +++r+etr gC+a+++++ dgk++v k++++H+ PIN10912.1 11 KFYNEYARAAGFSIRKHTVHRD-IKGRIIDRTFCCACQGHRQKDKRN-ANVKSHRPETRKGCHAMMRITSCFDGKYKVVKFVTDHS 94 6*************999998.8888*************999.99999******************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MEFDSEETAY KFYNEYARAA GFSIRKHTVH RDIKGRIIDR TFCCACQGHR QKDKRNANVK 60 SHRPETRKGC HAMMRITSCF DGKYKVVKFV TDHSGHDVVS PSKTHMLRSH RSISVAQALQ 120 ANDIDSSGIT PKAGFALMAK QVGGRENVGF IFEDYKNYLR SKRTVEMKTG DTGGVLEYLQ 180 QKQLDDPNFF YAIQVDADDL IANILWVDAQ MMADYAYFGD VVCFDTTYRK NKEGRPFALF 240 VGVNHHKQTV VFGAALLYDE TTSTFTWLFD TFARAMSGKQ PKTILTDQDA AMAKALALKW 300 PKTSHRLCIW HIYQNAAIHL SGIFSNFASF SKDFSSCIYD YEEEEEFLHA WYEMLEKYGL 360 QTNEWMERLF KIREKWALVY GRQIFCADLM TTQRSESMNS VLKRYVSYKH NLLQFFHHFD 420 RLIEDRRYQE LKADLRTSHS TPVASFSVEI MKHAASVYTH EVFELFQDEV RKAYDSRVEL 480 CGESGEIFEY KVTPFKKHYQ HTVWYDSSEG KVSCSCKKFE FAGILCSHAL KVLSARNIVK 540 IPDIYIKKRW TKKAKKNVVE PQSSGLGLCK KINYLEWYLV LKYLKRRLLY WTMMIMRLTK 600 L

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MEFDSEETAY KFYNEYARAA GFSIRKHTVH RDIKGRIIDR TFCCACQGHR QKDKRNANVK  60
SHRPETRKGC HAMMRITSCF DGKYKVVKFV TDHSGHDVVS PSKTHMLRSH RSISVAQALQ  120
ANDIDSSGIT PKAGFALMAK QVGGRENVGF IFEDYKNYLR SKRTVEMKTG DTGGVLEYLQ  180
QKQLDDPNFF YAIQVDADDL IANILWVDAQ MMADYAYFGD VVCFDTTYRK NKEGRPFALF  240
VGVNHHKQTV VFGAALLYDE TTSTFTWLFD TFARAMSGKQ PKTILTDQDA AMAKALALKW  300
PKTSHRLCIW HIYQNAAIHL SGIFSNFASF SKDFSSCIYD YEEEEEFLHA WYEMLEKYGL  360
QTNEWMERLF KIREKWALVY GRQIFCADLM TTQRSESMNS VLKRYVSYKH NLLQFFHHFD  420
RLIEDRRYQE LKADLRTSHS TPVASFSVEI MKHAASVYTH EVFELFQDEV RKAYDSRVEL  480
CGESGEIFEY KVTPFKKHYQ HTVWYDSSEG KVSCSCKKFE FAGILCSHAL KVLSARNIVK  540
IPDIYIKKRW TKKAKKNVVE PQSSGLGLCK KINYLEWYLV LKYLKRRLLY WTMMIMRLTK  600
L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	581	587	LKYLKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-138	FAR1 family protein