PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10904.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 500aa MW: 55716.3 Da PI: 6.5026

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.3e-07	255	276	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H PIN10904.1 255 FCTICGKGFKRDANLRMHMRGH 276 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MDPEERPCAD SWTKSSNNRS FASIDSQQQK WEASSFHDYG LRIEQQISAF NQAFGAQNSV 60 SCNMNSQNDP QDKQMSEARK PNEPQDWDPR AMLNNLSFLE KKIHQLQDLV HLIVGRRCQV 120 TGRTDEILVQ QQQLITADLT SIIVQLISTA GSLLPSVKHT LCSESPISQL GQFGGMSNQS 180 TGVSDGMVVP NNNSMNKVEN QSNAMGFLGS EQNCPIEDHE MKSDDDADEG ENLPPGSYEI 240 LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTPAALAKPN KEPSSEPVLI 300 KRYSCPFVGC KRNKDHKKFQ PLKTILCVKN HYKRTHCDKT YTCSRCNTKK FSVIADLKTH 360 EKHCGRDKWL CSCGTTFSRK DKLFGHIALF QGHTPAIPVE EPKGSVGPSD RGQCGEASKI 420 EQLEFNYKSG QNIMDVEGSS ADNPTNYFLP MGFDTGSISG FSEFPRPSFE DSESSFSFLL 480 SGSGNYPPKD GRYAGSNNLE

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MDPEERPCAD SWTKSSNNRS FASIDSQQQK WEASSFHDYG LRIEQQISAF NQAFGAQNSV  60
SCNMNSQNDP QDKQMSEARK PNEPQDWDPR AMLNNLSFLE KKIHQLQDLV HLIVGRRCQV  120
TGRTDEILVQ QQQLITADLT SIIVQLISTA GSLLPSVKHT LCSESPISQL GQFGGMSNQS  180
TGVSDGMVVP NNNSMNKVEN QSNAMGFLGS EQNCPIEDHE MKSDDDADEG ENLPPGSYEI  240
LQLEKEEILA PHTHFCTICG KGFKRDANLR MHMRGHGDEY KTPAALAKPN KEPSSEPVLI  300
KRYSCPFVGC KRNKDHKKFQ PLKTILCVKN HYKRTHCDKT YTCSRCNTKK FSVIADLKTH  360
EKHCGRDKWL CSCGTTFSRK DKLFGHIALF QGHTPAIPVE EPKGSVGPSD RGQCGEASKI  420
EQLEFNYKSG QNIMDVEGSS ADNPTNYFLP MGFDTGSISG FSEFPRPSFE DSESSFSFLL  480
SGSGNYPPKD GRYAGSNNLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-179	C2H2 family protein