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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PIN10896.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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| Family | NAC | ||||||||
| Protein Properties | Length: 286aa MW: 33245.3 Da PI: 6.1693 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 172.2 | 1.5e-53 | 7 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96
+ppGfrFhPt+eelv +yL++k+++ k++l +vi ++d+y++ePwd++ ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+vls k
PIN10896.1 7 VPPGFRFHPTEEELVGYYLRRKINSMKIDL-DVIIDIDLYRMEPWDIQDrckLGYEEQNEWYFFSHKDRKYPTGTRTNRATTAGFWKATGRDKAVLS-K 103
69****************************.99**************952432234677**************************************.8 PP
NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128
++ +g++ktLvfykgrap+g+ktdW+mheyrl
PIN10896.1 104 DRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 135
899***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 286 aa Download sequence |
MEMESCVPPG FRFHPTEEEL VGYYLRRKIN SMKIDLDVII DIDLYRMEPW DIQDRCKLGY 60 EEQNEWYFFS HKDRKYPTGT RTNRATTAGF WKATGRDKAV LSKDRIIGMR KTLVFYKGRA 120 PNGRKTDWIM HEYRLQTSEH GPPQEEGWVV CRAFKKPIPS HKPAFGAWNI NTCYHISNNS 180 SYKPASYTCL DPNSQLNQDQ NFNQPPLIQN QVINELPKLD SPTISTSFAT NEEINEDDQK 240 SNFGSDWKSF DNLLGFQLIG TSSNAYTNMP FIPHNDDQLL ECFSDL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G71930.1 | 1e-100 | NAC family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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