PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN10618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | TCP | ||||||||
Protein Properties | Length: 282aa MW: 29728 Da PI: 9.8085 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 121.8 | 7.8e-38 | 40 | 152 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.......... 88 ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ +++s ++s+s ss++ PIN10618.1 40 PVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFStvSPSSARNSSS-SSISaaldhkplsh 137 579*************************************************************99999666554444444444.22324565566666 PP TCP 89 ..............k 89 + PIN10618.1 138 slltptpfilgkrlR 152 666554444444431 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MSTSATEGAN GGGGPIVDPS QRHHQLQSPS TNNTNNAALP VKKPPAKDRH SKVDGRGRRI 60 RMPIICAARV FQLTRELGHK SDGQTIEWLL RQAEPSIIAA TGTGTTPATF STVSPSSARN 120 SSSSSISAAL DHKPLSHSLL TPTPFILGKR LRPDDDDHHQ HLSKDDVTSA SASMGPTVAA 180 GGFWALPARP DFGQVWSFAA PPPEMVVAAA AASNNSQQQQ PHSASLRFLQ QQQPLGIGEA 240 SAARVGNYLP IAQVQGHHLN LLASLSGPPP QSSEQQRDGD AN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 1e-60 | TCP family protein |