PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10542.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 263aa    MW: 28366.6 Da    PI: 4.8607
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-1875125155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  PIN10542.1  75 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALSIKG 125
                 68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MELGSISRIM KNTENRNSDS SETSSNNSLF SFSSSSLSSQ SPPPDTSATK GEEPPQTAKK  60
IKRIREVNNS SSKHPVYRGV RMRNWGKWVS EIREPRKKSR IWLGTFSTPE MAARAHDVAA  120
LSIKGASAIL NFPELAAALP RPVSLSPRDV QAAAAKAAAM DKFDVLSSPS STSSSSSMLS  180
SSPSLSSLVT AMDLSTTSEE LSEIVELPSL DSCFDSLEVR NDFVYVDNTA LEDWLDPPQP  240
WGGGGVADDG GIPTGFETLV WNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-60ERF family protein