PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10512.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 748aa MW: 87022 Da PI: 8.7543

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.3	8.3e-21	57	145	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY +Y+++ GF+vr+ ++k+ + +++ ++vCs+ g+r++ k +++++rr+r+etr+gCka+++v ++ dg ++vt+++ HnH+l PIN10512.1 57 FYWNYGRQNGFDVRRCHKKTV-NGSLVKNIEWVCSRAGFRQPLKYEARRKRRPREETRCGCKARFRVAHDQhDGLYKVTEFVPFHNHALE 145 9************998877.7777999***********************************9999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 748 aa Download sequence
MDEDKRKGQC NGNSVDDKSD RNLDAKGRFS LESNFLQLNP EEIGELVFNS QDEADWFYWN 60 YGRQNGFDVR RCHKKTVNGS LVKNIEWVCS RAGFRQPLKY EARRKRRPRE ETRCGCKARF 120 RVAHDQHDGL YKVTEFVPFH NHALETPETA HHLRCNRHLK PSQKNLLSGM TNDGISPSKA 180 IDYLKHIEGG AEKVAFRRKD VYNYLNKQRM LMTRDGDVNT TLSLLDGMKL HDKDMVFEYT 240 VDEEYALTRL FWTDGLSRAE FDLFGDVVVF DSTYKTNKYC FPLVIISGVD NHYSTCVFGA 300 ALLYNETIES YQWLLQKFRE AMGGKMPISV LTDQDATMHA AIEIDWHLER NAMQNTHIPE 360 FARDFAQLLK KRYSIEEFES SWLTLIERHG MADHPWIIDI FKKKELWGEA YFRGHFFGMM 420 RTTQRSESMN YLMKQCLKQR MNLTEFLKQY HLCIQKMRAT FFRNQEDSER STPSLLIDAL 480 NSLEKHAASV YTKKLFEMVS KEIRKEQDLV VEEASNHDGN KFTFQFSSYA KAHGKPVIVQ 540 IDWVAQKFQC DCEKLESTGL PCRHLISAFK LLRLQEFPQK CIKERWTVKL GKELRVNFPT 600 PFPFEDEQRR RFAILNRECA SLCLQASQSE QATFKSLMRI QDLVQQVEDE NTTNSPSKDS 660 VQLGKVKLPT ARDPKRTRLS HDVHNPKKIR CRGAPKAKQQ NCRKCGQPGH KANTCGRSPR 720 KFTDHPNCGA NVEAFEKASK INDDNCSI

Sequence ? help Back to Top

Protein Sequence Length: 748 aa Download sequence

MDEDKRKGQC NGNSVDDKSD RNLDAKGRFS LESNFLQLNP EEIGELVFNS QDEADWFYWN  60
YGRQNGFDVR RCHKKTVNGS LVKNIEWVCS RAGFRQPLKY EARRKRRPRE ETRCGCKARF  120
RVAHDQHDGL YKVTEFVPFH NHALETPETA HHLRCNRHLK PSQKNLLSGM TNDGISPSKA  180
IDYLKHIEGG AEKVAFRRKD VYNYLNKQRM LMTRDGDVNT TLSLLDGMKL HDKDMVFEYT  240
VDEEYALTRL FWTDGLSRAE FDLFGDVVVF DSTYKTNKYC FPLVIISGVD NHYSTCVFGA  300
ALLYNETIES YQWLLQKFRE AMGGKMPISV LTDQDATMHA AIEIDWHLER NAMQNTHIPE  360
FARDFAQLLK KRYSIEEFES SWLTLIERHG MADHPWIIDI FKKKELWGEA YFRGHFFGMM  420
RTTQRSESMN YLMKQCLKQR MNLTEFLKQY HLCIQKMRAT FFRNQEDSER STPSLLIDAL  480
NSLEKHAASV YTKKLFEMVS KEIRKEQDLV VEEASNHDGN KFTFQFSSYA KAHGKPVIVQ  540
IDWVAQKFQC DCEKLESTGL PCRHLISAFK LLRLQEFPQK CIKERWTVKL GKELRVNFPT  600
PFPFEDEQRR RFAILNRECA SLCLQASQSE QATFKSLMRI QDLVQQVEDE NTTNSPSKDS  660
VQLGKVKLPT ARDPKRTRLS HDVHNPKKIR CRGAPKAKQQ NCRKCGQPGH KANTCGRSPR  720
KFTDHPNCGA NVEAFEKASK INDDNCSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-80	FAR1 family protein