PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN10434.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 28670.4 Da PI: 5.1756 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.6e-19 | 108 | 158 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd + k +r +lg+f taeeAa a+++a+++++g PIN10434.1 108 HYRGVRRRP-WGKYAAEIRDsT--R-KGARLWLGTFETAEEAAMAYDKAALRIRG 158 8********.**********32..2.24*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MDVSSSEAIL ENVWAKFISR RDSDNTKQTT LKSSNSWEEL PNLDRKESKE MLERLPSLGR 60 WISMGAEEWE LLLDGIINPD PNSETMTKDS CTKADSTVKA EKLEVKKHYR GVRRRPWGKY 120 AAEIRDSTRK GARLWLGTFE TAEEAAMAYD KAALRIRGPK THLNFPLEIV SKELGISCYE 180 NCMTLSDTCV SCSNVVDKHH RKRVARESEV EEDLMFLDEQ PAKRRLREND VLEFEELGSE 240 YLESLLYSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 4e-33 | ERF family protein |