PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10331.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YA
Protein Properties Length: 324aa    MW: 35664 Da    PI: 9.7519
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.62.7e-30166220358
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 p++VNaKQy++Il+RR++Rak+e e+kl  k rkpylh SRh hA+rRpRg+gGrF
  PIN10331.1 166 PIFVNAKQYNGILRRRKSRAKAEMENKL-LKLRKPYLHLSRHLHAMRRPRGNGGRF 220
                 9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MTMHTVFFKE YEGIAPNSIN GELSEVSRWN GLQGSQPPPP TATEAAYGDP FVQSKLSCSA  60
GGNQFTVARE TEDQQVLGKG NATHFTLFSG DCRTPENVAK TNLQTVSSLQ PASMEYQGHF  120
KLGFGQPLIC AQYPYPEQCY GVYSTYGTQI AGRIMLPFSM AGDGGPIFVN AKQYNGILRR  180
RKSRAKAEME NKLLKLRKPY LHLSRHLHAM RRPRGNGGRF LNTKDTNNSN NHSNDKCKKG  240
NTNENQKPHP KQAESQVSEV LQSDGGINNS KGTKGCSSTS PGSEVTSNVH FYQINRFDPS  300
FQPFPNLANT RLGIAMTGGN YLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05690.12e-50NF-YA family protein