PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN10311.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | FAR1 | ||||||||
Protein Properties | Length: 157aa MW: 18255.2 Da PI: 6.3406 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 42.6 | 2e-13 | 70 | 143 | 2 | 75 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgk 75 fY +Y++++GF++r+ ++k+ ++ +++r++vCs+ g+ +++ ++++++rr+++et+ gC a + v + dg PIN10311.1 70 FYLTYGRDMGFDIRRCHKKTI-DSWLVKNREWVCSRAGYWKDRGNNQRQNRRPKSETQYGCPAAFWVAHDIvDGL 143 9**************998777.7777*************************************999887654555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MTSSLVKNDE PYNNIQYDNN GFNDEAPRSC RSESTTNPNE ALTSITNCMV PDFETITQLV 60 FESDLDADLF YLTYGRDMGF DIRRCHKKTI DSWLVKNREW VCSRAGYWKD RGNNQRQNRR 120 PKSETQYGCP AAFWVAHDIV DGLYKSHTLH HFTTIPC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 5e-09 | FAR1 family protein |