PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN10303.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 210aa MW: 24644.8 Da PI: 5.5026 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.1 | 3.2e-16 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W ++Ede+l+ +v++lG ++W++ a+ g++R++k+c++rw +yl PIN10303.1 8 KGPWLEDEDEKLAAVVALLGERRWDSLAKASGLRRSGKSCRLRWMNYL 55 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.7e-17 | 62 | 105 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+ ++eE++ +++++k++G++ W++Ia++++ gRt++++k++w++y PIN10303.1 62 GKISKEEEKVIIELHKKWGNK-WSRIAQRLP-GRTDNEIKNYWRSY 105 6789*****************.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MQEVELRKGP WLEDEDEKLA AVVALLGERR WDSLAKASGL RRSGKSCRLR WMNYLRPNLK 60 HGKISKEEEK VIIELHKKWG NKWSRIAQRL PGRTDNEIKN YWRSYSKKKA VVLEKECLSS 120 SVNTPCSISD ESFLIKDDVL GLSDDASDAL EPLNWTRSPY ETRLSEWMSN WPPDTRKTDK 180 LWDYEVYSSQ WIFDECNIGT WDDLSLWDGE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 6e-52 | MYB family protein |