PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10253.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 484aa MW: 51400.2 Da PI: 9.5837

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	423	445	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++Cg + + +++L rH+ H PIN10253.1 423 YHCGICGLRLKLQESLDRHMEWH 445 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MLLGPGKDIS GYSRGYTGGL KSSSNIVGRT AYTKQQGAAT IGGPNFKFSA NAMPGPKVSV 60 TQQRQTLGTV SSSMQSAMRH YSPSPSPLEH NPDQPLKSLA ERNQTSTGPP TDPRRPLGPR 120 NTGSHDQFSQ DSPPLPSRDV YQSSTQRFQA QSLQTSSAVM SPPQQRKHVP STQQRKLEAS 180 EFGSSGDGQN LSTQISGSES RSTMENSSFD QSNPFTVDSP GQSITNSLLT AVVKSGKLGS 240 SSPVGPVQPP LPSGPPPVSF RPLHGSKLLP VFQKKLEQPS LPPSLPPSSL SGIGTEQTPS 300 TVMSTSNPVS SLISSLVAKG LISASKSDTP SSASIQCPNQ PLDGVTGVSS TIATPDSSVT 360 VTIGRSPLYI TDGTSSSKPA AKDTDSLQST TKIKNLIGFE FRPDVVRKFH TDVITDLLSD 420 LPYHCGICGL RLKLQESLDR HMEWHALRVP GENPLNENSW RWYSSSVDWV AGVGYLSAAN 480 NTSE

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MLLGPGKDIS GYSRGYTGGL KSSSNIVGRT AYTKQQGAAT IGGPNFKFSA NAMPGPKVSV  60
TQQRQTLGTV SSSMQSAMRH YSPSPSPLEH NPDQPLKSLA ERNQTSTGPP TDPRRPLGPR  120
NTGSHDQFSQ DSPPLPSRDV YQSSTQRFQA QSLQTSSAVM SPPQQRKHVP STQQRKLEAS  180
EFGSSGDGQN LSTQISGSES RSTMENSSFD QSNPFTVDSP GQSITNSLLT AVVKSGKLGS  240
SSPVGPVQPP LPSGPPPVSF RPLHGSKLLP VFQKKLEQPS LPPSLPPSSL SGIGTEQTPS  300
TVMSTSNPVS SLISSLVAKG LISASKSDTP SSASIQCPNQ PLDGVTGVSS TIATPDSSVT  360
VTIGRSPLYI TDGTSSSKPA AKDTDSLQST TKIKNLIGFE FRPDVVRKFH TDVITDLLSD  420
LPYHCGICGL RLKLQESLDR HMEWHALRVP GENPLNENSW RWYSSSVDWV AGVGYLSAAN  480
NTSE