PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10142.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 769aa MW: 85419.6 Da PI: 8.3298

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	113.8	1e-35	135	211	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gCead++e+k yh+rh+vC ++ a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+Lakhn+rr++k PIN10142.1 135 RCQVPGCEADITELKGYHKRHRVCLRCAYASSVVLDGESKRYCQQCGKFHLLSDFDESKRSCRRKLAKHNKRRQRKP 211 6************************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
MQQNSPPPAP APAYLPRSSE MDLAAPHILS GEPASSSLFD WSDFLDFNLD EALNTSFPSS 60 EPGSGFGPEP EINQSQGSEN VGRVRKRDPR LVCSNFLAGR VPCACPELDE KFEQAGLPGK 120 KRTRMVRASG GGPVRCQVPG CEADITELKG YHKRHRVCLR CAYASSVVLD GESKRYCQQC 180 GKFHLLSDFD ESKRSCRRKL AKHNKRRQRK PNDSKGGTEK EAQEIIFADD VSGDDDSGKD 240 GISPSSQSEE REILLESDRH VTTLCSALGS QNLHGDSIAS FSARGEIHID GQKQNAKYKL 300 SPSYCGNKKT FSPMCPAGRI SFKLYDWNPA EFPRRLRHQI FEWLANMPIE LEGYIRPGCT 360 ILTAFIAMPK PMWLKLLEEP ARCIKDLVAS PGNMLSGRGT MLVYLNDMVF RVTKDANSIA 420 KVRVKDQSPK LHYIHPNCFE AGRPMEFVAC GSNLLQPKFR FLVSFAGRYL AYNICVSSLC 480 CKKGDSNGFD HQLVKISIPQ TDTNLFGPAF VEVENQSGLS NFIPILVGDK ETCAEMETLQ 540 QKFDTSLSSQ AQQPSPPSSS CEVFALRQAQ FSEFVLDVAW SLKTPVPEQQ LTSSHIQRFS 600 YLLTFLIEKE SSVILERVFC SLKSNIGSNL GAGVSDADMM SLRKNMGIAK SMLDQKLQEK 660 VFKVTPALDG NRYGQSHQKD NRVVVPATNT DMRETVPLLN REVIMNVNIP TRPQKSFSRF 720 LTRTSLTSRP LMMSIAAVGI CFGLCAVILH PQQVSQIATT IRRCLFDSS

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

MQQNSPPPAP APAYLPRSSE MDLAAPHILS GEPASSSLFD WSDFLDFNLD EALNTSFPSS  60
EPGSGFGPEP EINQSQGSEN VGRVRKRDPR LVCSNFLAGR VPCACPELDE KFEQAGLPGK  120
KRTRMVRASG GGPVRCQVPG CEADITELKG YHKRHRVCLR CAYASSVVLD GESKRYCQQC  180
GKFHLLSDFD ESKRSCRRKL AKHNKRRQRK PNDSKGGTEK EAQEIIFADD VSGDDDSGKD  240
GISPSSQSEE REILLESDRH VTTLCSALGS QNLHGDSIAS FSARGEIHID GQKQNAKYKL  300
SPSYCGNKKT FSPMCPAGRI SFKLYDWNPA EFPRRLRHQI FEWLANMPIE LEGYIRPGCT  360
ILTAFIAMPK PMWLKLLEEP ARCIKDLVAS PGNMLSGRGT MLVYLNDMVF RVTKDANSIA  420
KVRVKDQSPK LHYIHPNCFE AGRPMEFVAC GSNLLQPKFR FLVSFAGRYL AYNICVSSLC  480
CKKGDSNGFD HQLVKISIPQ TDTNLFGPAF VEVENQSGLS NFIPILVGDK ETCAEMETLQ  540
QKFDTSLSSQ AQQPSPPSSS CEVFALRQAQ FSEFVLDVAW SLKTPVPEQQ LTSSHIQRFS  600
YLLTFLIEKE SSVILERVFC SLKSNIGSNL GAGVSDADMM SLRKNMGIAK SMLDQKLQEK  660
VFKVTPALDG NRYGQSHQKD NRVVVPATNT DMRETVPLLN REVIMNVNIP TRPQKSFSRF  720
LTRTSLTSRP LMMSIAAVGI CFGLCAVILH PQQVSQIATT IRRCLFDSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein