PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10102.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HSF
Protein Properties Length: 281aa    MW: 31045.8 Da    PI: 7.3066
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind119.71.6e-37101022103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++++isw+e g++fvv+++ efak++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fk+g+kell +i+
    PIN10102.1  10 FLTKTYHLVDDPTTDDVISWNEAGTTFVVWKTAEFAKDLLPNYFKHNNFSSFVRQLNTYGFRKTVPDK---------WEFANDNFKRGQKELLAQIR 97 
                   9***************************************************************9999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k++
    PIN10102.1  98 RRKTA 102
                   **975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MAQRSVPAPF LTKTYHLVDD PTTDDVISWN EAGTTFVVWK TAEFAKDLLP NYFKHNNFSS  60
FVRQLNTYGF RKTVPDKWEF ANDNFKRGQK ELLAQIRRRK TASTPTAKPG AADNLNSPAI  120
SGEDLGSSST SSPDSKHPGS LETQASAQLA DLSGENEKLR KDNQMLSSEL AQTKKQCDEL  180
IAFLTQCVKV APEQISRIMN LGADYGSVAG EEVCDGRSDN DDDEKESCMK LFGVVVKKKR  240
GCSENSDFSG PRKKEMKRSL EVNAPWMKIS ASPGDSSKVC N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237257KKKRGCSENSDFSGPRKKEMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.18e-83HSF family protein