PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10070.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 303aa    MW: 33536.1 Da    PI: 7.6249
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-10128173555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++Er+RR+++ + f  L  ++P +     kK +K +iL  A+ Y+k+L+
  PIN10070.1 128 HIIAERKRREQLGQLFIALSAIIPGL-----KKTDKTSILGDAISYLKHLR 173
                 899***********************.....9*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MDSFDGELGA VFGHGLPNYV SRQSDSSLSS STMINVLSSN SLTSSLYNFP TKFPSIFDDT  60
TAISRLDHQA SSTPIILNFD KANTSGNLPK FFQQANPMSC LNIINPTQRS QQKNKKTRTR  120
PPSQTYDHII AERKRREQLG QLFIALSAII PGLKKTDKTS ILGDAISYLK HLRERVEVLE  180
VKAAEQTMDS IVVKKSQIIV DEEGSSDERS VSSDEKEMPE IEVRLTNNSI LLRVHCSKQK  240
GVLANLLSKV ESLDMVVVNT NVTPFGTSAL DVTITAEMEK EFSLTVKEVA TVLRAALRER  300
VSV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132137ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-50bHLH family protein