PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10069.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 347aa    MW: 38313.3 Da    PI: 4.6007
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-11170215555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++Er+RR+++ ++f  L +++P +     kK +K ++L  A++Y+k Lq
  PIN10069.1 170 HIIAERKRREQLSQRFVVLSTIVPGL-----KKTDKTSVLGDAIKYLKFLQ 215
                 899***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MDSTAVSWLS EMGLDNPIFT DQFDLTDSFD EELAAMLGQD FEACLSPENS LSPSSTLINV  60
PSSNSIPSLS TSPSEPPAKL QKPNSYSNFS TIQGQPTSDR AASSTPIILS FGNANSPENP  120
HQANPQSLNP DEEAVVSEIL KSQDSEDRPK RVQNTKKTTR VRPPSQTYDH IIAERKRREQ  180
LSQRFVVLST IVPGLKKTDK TSVLGDAIKY LKFLQERVKV LEEQATKKTM ESVVLVKKSQ  240
MAMEDDESSD EKSPSLNEVP LPEIEARICN TQILIRVHCE NQMGLLANLI SQVEKLSLTI  300
VNTNVASFGS LALDITIITE MEKEFNLTVN EVVRTLRAAL IQPALPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174179ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-59bHLH family protein